BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002H12LP1|AL425044
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1638 1004 0.0
>3x_Contig1638
Length = 14042
Score = 1004 bits (499), Expect = 0.0
Identities = 604/641 (94%)
Strand = Plus / Minus
Query: 4 atatnaacaaagtaacgtgataaatcacatgacttgaaatcaatcgtttctgtaaacaaa 63
|||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 12344 atatcaacaaagtcacgtgatatatcacatgacttgaaatcaatcgtttctgtaaacaaa 12285
Query: 64 aacaatcaaaatcaaccagtaaaaaaacaaacagacgagaaaacatgaataaaatagaag 123
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
Sbjct: 12284 aacaatcaaaatcaaccagtaaacaaacaaacagacgagacaacatgaataaaatagacg 12225
Query: 124 gtcagtgagtaaacacagggtgctgccagctgtatcgcgtgtgtatatttcccatggata 183
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 12224 gtcagtgagtcaacacagggtgctgccagctgtatcgcgtgtgtatatctcccatggata 12165
Query: 184 acgctacggatgattcggggtcttttcagaatctgttactagatgagagaattgttcata 243
|||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 12164 acgctacggatgattcggcgtcttttcagactctgtcactagatgagagacttgttcata 12105
Query: 244 agctttggaagggaagaaagcatggatataatgagctagaaagcacattcaataaaatgt 303
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 12104 agctttggaaggcaagacagcatggatataatgagctagaaagcacattcaataaactgt 12045
Query: 304 tcgttgctagagttgcagagagtggggttaataagtattggaagaaacctgagattttta 363
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 12044 ccgttgctagagttgcagagagtggcgttaataagtattggaagaaacctgagattttca 11985
Query: 364 cggggtacgtattggatttcaatgttgttggacaagaatttgccgttaaggccttgtaaa 423
|||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| |
Sbjct: 11984 cggggtacgtattggattccaatgttgttgcacaagaatctgccgttaaggccttgtaca 11925
Query: 424 gtttgttgaaatttatgatcgaagtaccccagatcagagatttgtgttagcggggtcaat 483
|||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||
Sbjct: 11924 gtttgttgaaatttatgatcgacgtaccccagatcagagatttgtgtcagccgggtcaat 11865
Query: 484 tggttcagggctgggttccagctctggtggagaaaggtatgaattcctcgaaatcagcga 543
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 11864 tggttcagggctgggttccagctctggtggagaaaggtatgacttcctcgaaatcagcga 11805
Query: 544 agaaagaggcttcattggcctgcgtttcgcttgttstgtcattggatgataatatastaa 603
||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 11804 cgaaagaggcttcattggcctgcgtttcgcttgtcgtgtcattggatgataatatcgtaa 11745
Query: 604 atgaaataaattgtctgaagcagatttggaanaaaaaatta 644
||| ||| |||||||||| || |||||||| |||||||||
Sbjct: 11744 atgcaatcaattgtctgacgccgatttggaccaaaaaatta 11704
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6792
Number of Sequences: 1807
Number of extensions: 6792
Number of successful extensions: 161
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)